chr4:55980456:C>A Detail (hg19) (KDR)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr4:55,980,456-55,980,456 |
| hg38 | chr4:55,114,289-55,114,289 View the variant detail on this assembly version. |
HGVS
| Type | Transcript | Protein |
|---|---|---|
| RefSeq | NM_002253.2:c.659-24G>T | |
| Ensemble | ENST00000263923.5:c.659-24G>T |
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
| JP | HGVD:[No Data.] |
| ToMMo:[No Data.] | |
| NCBN:[No Data.] | |
| NCBN(Hondo):[No Data.] | |
| NCBN(Ryukyu):[No Data.] | |
| East asia | ExAC:<0.001 |
Prediction
ClinVar
| Clinical Significance | |
| Review star | [No Data.] |
| Show details | |
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| 0.083 | Hypertensive disease | Two additional SNPs, rs4444903 in EGF and rs2305949 in KDR, were associated with... | BeFree | 24558090 | Detail |
| 0.003 | Hypertensive disease | Two additional SNPs, rs4444903 in EGF and rs2305949 in KDR, were associated with... | BeFree | 24558090 | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| Two additional SNPs, rs4444903 in EGF and rs2305949 in KDR, were associated with hypertension (allel... | DisGeNET | Detail |
| Two additional SNPs, rs4444903 in EGF and rs2305949 in KDR, were associated with hypertension (allel... | DisGeNET | Detail |
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- Genome
- hg19
- Position
- chr4:55,980,456-55,980,456
- Variant Type
- snv
- Reference Allele
- C
- Alternative Allele
- A
- East Asian Chromosome Counts (ExAC)
- 8574
- East Asian Allele Counts (ExAC)
- 0
- East Asian Heterozygous Counts (ExAC)
- 0
- East Asian Homozygous Counts (ExAC)
- 0
- East Asian Allele Frequency (ExAC)
- 0.0
- Chromosome Counts in All Race (ExAC)
- 120644
- Allele Counts in All Race (ExAC)
- 1
- Heterozygous Counts in All Race (ExAC)
- 0
- Homozygous Counts in All Race (ExAC)
- 0
- Allele Frequency in All Race (ExAC)
- 8.288849839196314E-6
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